STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_2489PFAM: transcriptional regulator PadR family protein; KEGG: rca:Rcas_2179 transcriptional regulator, PadR-like family. (189 aa)    
Predicted Functional Partners:
Caur_2490
TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rca:Rcas_2178 molybdenum ABC transporter, periplasmic molybdate-binding protein.
       0.822
Caur_2491
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
       0.817
Caur_2488
PFAM: oxidoreductase molybdopterin binding; KEGG: rxy:Rxyl_2351 oxidoreductase, molybdopterin binding protein.
       0.456
Caur_2656
PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: chy:CHY_0677 transcriptional regulator, MerR family.
  
  
 0.411
Caur_3003
KEGG: rrs:RoseRS_4017 regulatory protein, ArsR.
 
  
 0.405
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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