STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_2644KEGG: rca:Rcas_0803 N-acetylglucosamine-1-phosphate uridyltransferase-like protein. (498 aa)    
Predicted Functional Partners:
Caur_2645
PFAM: response regulator receiver; SMART: GGDEF domain containing protein; KEGG: rrs:RoseRS_4451 response regulator receiver modulated diguanylate cyclase.
 
     0.911
Caur_2646
PAS sensor protein; KEGG: rca:Rcas_0805 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
     0.882
Caur_1578
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1146 tetratricopeptide TPR_2 repeat protein.
 
     0.790
Caur_1589
PFAM: protein of unknown function DUF95 transmembrane; KEGG: rca:Rcas_1668 protein of unknown function DUF95 transmembrane.
  
   
 0.786
Caur_0711
KEGG: rrs:RoseRS_2657 hypothetical protein.
 
     0.772
Caur_2658
TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: rrs:RoseRS_2026 metal dependent phosphohydrolase.
 
    0.771
Caur_0253
Hypothetical protein; KEGG: rca:Rcas_2219 putative FHA domain containing protein.
  
     0.769
Caur_1608
PFAM: PHP domain protein; AAA-4 family protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_1312 AAA-4 family protein.
 
     0.769
Caur_0695
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0774 TPR repeat-containing protein.
  
     0.766
Caur_1596
KEGG: rrs:RoseRS_3483 hypothetical protein.
  
     0.763
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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