STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_2675PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lin:lin0218 similar to sugar ABC transporters, permease proteins. (313 aa)    
Predicted Functional Partners:
Caur_3449
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_0525 ABC transporter related.
 
 
 0.978
Caur_3154
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gka:GK0706 maltose/maltodextrin transport system (permease).
 
 0.972
Caur_2676
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcz:BCZK1636 sugar ABC transporter, permease.
   0.970
Caur_2674
PFAM: extracellular solute-binding protein family 1; KEGG: bca:BCE_1899 extracellular solute-binding protein, putative.
   0.931
Caur_1076
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_3565 binding-protein-dependent transport systems inner membrane component.
   0.881
Caur_1108
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tel:tll1382 sugar transport system permease protein.
   0.881
Caur_1272
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4567 binding-protein-dependent transport systems inner membrane component.
   0.879
Caur_0362
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aau:AAur_0944 putative ABC-type sugar transport system, permease component.
   0.870
Caur_2020
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gtn:GTNG_0826 sugar transport system permease.
   0.870
Caur_3860
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fno:Fnod_0292 binding-protein-dependent transport systems inner membrane component.
   0.870
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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