Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_2801KEGG: rca:Rcas_2317 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD. (665 aa)    
Predicted Functional Partners:
Caur_2803
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
     
 0.760
Caur_2802
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; KR domain protein; KEGG: rrs:RoseRS_2303 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.745
Caur_2804
PFAM: phosphoribulokinase/uridine kinase; KEGG: gvi:glr4424 phosphoribulokinase.
     
 0.712
Caur_1585
PFAM: NLP/P60 protein; protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: rca:Rcas_1215 NLP/P60 protein.
     
 0.462
Caur_0981
PFAM: Lytic transglycosylase catalytic; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; KEGG: rca:Rcas_2690 lytic transglycosylase catalytic.
     
 0.453
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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