STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_2828PFAM: TPR repeat-containing protein; Sel1 domain protein repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rca:Rcas_3220 tetratricopeptide TPR_2 repeat protein. (1113 aa)    
Predicted Functional Partners:
Caur_1578
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1146 tetratricopeptide TPR_2 repeat protein.
 
 
 
 0.882
Caur_2826
PFAM: protein of unknown function DUF323; KEGG: rrs:RoseRS_0904 protein of unknown function DUF323.
 
   
 0.845
Caur_2827
KEGG: rrs:RoseRS_3927 hypothetical protein.
       0.826
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
  
 0.816
Caur_2825
PFAM: SEC-C motif domain protein; KEGG: rrs:RoseRS_1602 sec-C motif domain protein.
 
     0.804
Caur_1789
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pmf:P9303_28481 hypothetical protein.
 
0.775
Caur_1388
PFAM: Na-Ca exchanger/integrin-beta4; KEGG: afw:Anae109_2925 hypothetical protein.
 
 
 0.769
Caur_1035
PFAM: GAF domain protein; KEGG: rrs:RoseRS_2414 GAF sensor signal transduction histidine kinase.
 
 
 
 0.746
Caur_1862
Response regulator receiver; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rrs:RoseRS_2694 putative PAS/PAC sensor protein.
 
 
 
 0.745
Caur_0246
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1999 tetratricopeptide TPR_2 repeat protein.
 
     0.740
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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