Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_2833PFAM: luciferase family protein; KEGG: rca:Rcas_3981 luciferase family protein. (332 aa)    
Predicted Functional Partners:
Caur_2832
PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rrs:RoseRS_0434 carbamoyl-phosphate synthase L chain, ATP-binding.
       0.818
Caur_3615
TIGRFAM: F420-dependent oxidoreductase; PFAM: protein of unknown function DUF129; KEGG: rrs:RoseRS_1136 F420-dependent oxidoreductase, putative.
 
   
 0.815
fbiD
Protein of unknown function DUF121; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
 
   
 0.810
Caur_0204
TIGRFAM: LPPG domain protein containing protein; PFAM: protein of unknown function UPF0052 and CofD; KEGG: rca:Rcas_3979 LPPG domain containing protein.
 
   
 0.796
Caur_1395
KEGG: rrs:RoseRS_1517 coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductase-like protein.
  
     0.774
Caur_1590
KEGG: mjl:Mjls_0743 hypothetical protein.
  
   
 0.766
Caur_2831
Hypothetical protein.
       0.693
Caur_0597
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rca:Rcas_2232 pyridoxamine 5'-phosphate oxidase-related FMN-binding.
  
     0.654
Caur_2830
PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2520 von Willebrand factor, type A.
       0.576
Caur_0897
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rrs:RoseRS_2673 pyridoxamine 5'-phosphate oxidase-related, FMN-binding.
  
     0.517
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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