STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_2864Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rrs:RoseRS_3817 PAS/PAC sensor signal transduction histidine kinase. (403 aa)    
Predicted Functional Partners:
Caur_0876
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_3737 two component transcriptional regulator, winged helix family.
 
  0.984
Caur_3391
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rca:Rcas_0353 two component transcriptional regulator, winged helix family.
 
  0.976
Caur_0031
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: rca:Rcas_3221 response regulator receiver modulated diguanylate cyclase.
     0.936
Caur_2863
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_3818 two component transcriptional regulator, winged helix family.
   0.929
Caur_3514
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: xcv:XCV2971 putative sensor protein.
    
 0.905
Caur_2001
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rca:Rcas_4344 two component transcriptional regulator, winged helix family.
 
   0.897
Caur_2069
PFAM: response regulator receiver; KEGG: reh:H16_B2354 signal transduction histidine kinase containing two receiver domains (hybrid).
 
 
 0.849
Caur_3854
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rca:Rcas_0960 two component transcriptional regulator, winged helix family.
 
   0.835
Caur_0959
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rca:Rcas_2795 two component transcriptional regulator, winged helix family.
 
   0.830
Caur_0854
PFAM: response regulator receiver; KEGG: rrs:RoseRS_0997 response regulator receiver protein.
 
   0.827
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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