Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Caur_2871PFAM: WD40 domain protein beta Propeller; KEGG: rrs:RoseRS_1421 hypothetical protein. (550 aa)    
Predicted Functional Partners:
Caur_0981
PFAM: Lytic transglycosylase catalytic; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; KEGG: rca:Rcas_2690 lytic transglycosylase catalytic.
  
  
 0.611
Caur_1238
KEGG: rca:Rcas_3601 hypothetical protein.
  
 
 0.472
Caur_2870
TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: ter:Tery_1075 phenazine biosynthesis protein PhzF family.
     
 0.472
Caur_2995
Hypothetical protein.
   
 
 0.418
Caur_3004
KEGG: tth:TT_P0070 hypothetical protein.
  
   0.414
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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