STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_2995Hypothetical protein. (295 aa)    
Predicted Functional Partners:
Caur_3178
KEGG: rca:Rcas_0930 hypothetical protein.
  
 
 0.905
Caur_3832
KEGG: rxy:Rxyl_0417 hypothetical protein.
  
    0.853
Caur_2996
KEGG: ter:Tery_0501 hypothetical protein.
       0.752
Caur_1238
KEGG: rca:Rcas_3601 hypothetical protein.
  
 
 0.522
Caur_0647
PFAM: NHL repeat containing protein; KEGG: rrs:RoseRS_2986 PA14 domain protein.
  
    0.502
Caur_0892
Hypothetical protein; KEGG: rrs:RoseRS_2986 PA14 domain protein.
  
    0.502
Caur_1789
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pmf:P9303_28481 hypothetical protein.
  
 
 0.502
Caur_2550
KEGG: rrs:RoseRS_0242 NHL repeat containing protein.
  
    0.502
Caur_3861
PFAM: NHL repeat containing protein; KEGG: fno:Fnod_0291 NHL repeat containing protein.
  
    0.502
Caur_3884
KEGG: rrs:RoseRS_4300 hypothetical protein.
  
    0.502
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.