STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_3054TIGRFAM: sodium pump decarboxylase, gamma subunit; PFAM: sodium pump decarboxylase gamma subunit. (119 aa)    
Predicted Functional Partners:
Caur_3052
KEGG: pvi:Cvib_1251 sodium ion-translocating decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit.
    
  0.958
Caur_3053
PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: rru:Rru_A0049 biotin/lipoyl attachment.
    
  0.954
Caur_0101
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rle:RL0373 putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
     
  0.900
Caur_3432
KEGG: rrs:RoseRS_3692 sodium ion-translocating decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit.
     
  0.900
Caur_3433
PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: pho:PH1284 methylmalonyl-CoA decarboxylase gamma chain.
     
  0.900
Caur_3434
PFAM: sodium pump decarboxylase gamma subunit.
     
  0.900
Caur_3557
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rxy:Rxyl_0375 acyl-CoA dehydrogenase-like protein.
     
  0.900
Caur_3845
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: gfo:GFO_0313 acyl-CoA dehydrogenase.
     
  0.900
Caur_3055
PFAM: carboxyl transferase; KEGG: aba:Acid345_3025 carboxyl transferase.
       0.732
Caur_3056
PFAM: major facilitator superfamily MFS_1; KEGG: rsq:Rsph17025_3142 hypothetical protein.
       0.476
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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