STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_3155Hypothetical protein; KEGG: mxa:MXAN_7206 sensor histidine kinase/response regulator. (703 aa)    
Predicted Functional Partners:
Caur_3153
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ade:Adeh_4135 ABC sugar transporter, inner membrane subunit.
 
     0.890
Caur_3154
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gka:GK0706 maltose/maltodextrin transport system (permease).
 
     0.854
Caur_2927
PFAM: peptidase C1A papain; KEGG: reu:Reut_A2014 hypothetical protein.
  
     0.746
Caur_0584
PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: reu:Reut_A2011 hypothetical protein.
  
     0.736
Caur_0958
KEGG: reu:Reut_A2014 hypothetical protein.
  
     0.725
Caur_1035
PFAM: GAF domain protein; KEGG: rrs:RoseRS_2414 GAF sensor signal transduction histidine kinase.
 
 
   0.689
Caur_3152
PFAM: extracellular solute-binding protein family 1; KEGG: tko:TK1771 ABC-type maltodextrin transport system, maltodextrin-binding periplasmic component.
 
     0.686
Caur_3156
PFAM: putative esterase; KEGG: mmr:Mmar10_2741 putative esterase.
       0.686
Caur_2876
PFAM: Proprotein convertase P; FG-GAP repeat protein; KEGG: mac:MA0850 cell surface protein.
 
     0.682
Caur_0736
Hypothetical protein.
  
     0.681
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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