STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_3177PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_2799 putative zinc-containing alcohol dehydrogenase. (347 aa)    
Predicted Functional Partners:
Caur_3176
PFAM: protein of unknown function DUF59; KEGG: fra:Francci3_2515 protein of unknown function DUF59.
 
     0.945
Caur_3175
PFAM: amidohydrolase 2; KEGG: rsh:Rsph17029_1504 amidohydrolase 2.
 
     0.931
Caur_0394
PFAM: amidohydrolase 2; KEGG: rrs:RoseRS_2838 amidohydrolase 2.
 
     0.760
Caur_0416
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3261 alcohol dehydrogenase, zinc-binding domain protein.
 
 
 0.695
Caur_0034
KEGG: rca:Rcas_0831 hypothetical protein.
  
 
 0.522
Caur_1662
PFAM: iron-containing alcohol dehydrogenase; KEGG: rrs:RoseRS_2082 iron-containing alcohol dehydrogenase.
  
 
 0.522
Caur_2664
PFAM: iron-containing alcohol dehydrogenase; KEGG: rca:Rcas_1990 iron-containing alcohol dehydrogenase.
  
 
 0.522
Caur_3173
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sus:Acid_0071 two component transcriptional regulator, winged helix family.
       0.508
Caur_3174
PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN3606 two-component sensor KdpD sensory kinase.
       0.508
Caur_0613
PFAM: AMP-dependent synthetase and ligase; Enoyl-CoA hydratase/isomerase; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3202 AMP-dependent synthetase and ligase.
  
 
 0.459
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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