Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_3229PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: sth:STH493 two-component sensor histidine kinase. (728 aa)    
Predicted Functional Partners:
Caur_3230
PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: rxy:Rxyl_2809 two component transcriptional regulator, LuxR family.
 
 
 0.936
Caur_1927
PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pmy:Pmen_0083 two component transcriptional regulator, LuxR family.
 
 
 0.891
Caur_0022
PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: sth:STH3220 two-component response regulator.
 
 
 0.862
Caur_1211
PFAM: regulatory protein LuxR; response regulator receiver; KEGG: sth:STH3096 two-component response regulator.
 
 
 0.862
Caur_1397
PFAM: regulatory protein LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_3421 two component transcriptional regulator, LuxR family.
 
 
 0.862
Caur_1609
PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rca:Rcas_3262 two component transcriptional regulator, LuxR family.
 
 
 0.862
Caur_1622
PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: rrs:RoseRS_1633 two component transcriptional regulator, LuxR family.
 
 
 0.862
Caur_2638
PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: rca:Rcas_4428 two component transcriptional regulator, LuxR family.
 
 
 0.862
Caur_3377
PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rxy:Rxyl_2629 two component transcriptional regulator, LuxR family.
 
 
 0.862
Caur_3431
PFAM: regulatory protein LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_0454 two component transcriptional regulator, LuxR family.
 
 
 0.862
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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