STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
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[Homology]
Score
Caur_3237SMART: extracellular solute-binding protein family 3; KEGG: rrs:RoseRS_4005 extracellular solute-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family. (389 aa)    
Predicted Functional Partners:
Caur_3239
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_1456 polar amino acid ABC transporter, inner membrane subunit.
 
 0.986
Caur_3240
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cyb:CYB_0933 polar amino amino acid ABC transporter (PAAT) family, ATP-binding protein.
 
 0.983
Caur_3238
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4004 polar amino acid ABC transporter, inner membrane subunit.
 
 
 0.981
Caur_3172
PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: rca:Rcas_3278 extracellular solute-binding protein family 3.
  
     0.537
Caur_3274
PAS sensor protein; KEGG: sfu:Sfum_0942 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein.
   
 
 0.476
Caur_3544
PFAM: argininosuccinate synthase; KEGG: bmn:BMA10247_2224 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
  
  
 0.475
Caur_3258
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rca:Rcas_1903 glutamate synthase (ferredoxin).
  
  
 0.459
Caur_3534
Diguanylate cyclase; KEGG: ava:Ava_2710 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
     
 0.418
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: rrs:RoseRS_2403 argininosuccinate lyase.
  
  
 0.409
Caur_0102
PAS sensor protein; KEGG: ppd:Ppro_2908 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
 
 0.407
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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