STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_3240PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cyb:CYB_0933 polar amino amino acid ABC transporter (PAAT) family, ATP-binding protein. (249 aa)    
Predicted Functional Partners:
Caur_3239
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_1456 polar amino acid ABC transporter, inner membrane subunit.
 0.999
Caur_3238
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4004 polar amino acid ABC transporter, inner membrane subunit.
 
 
 0.988
Caur_3237
SMART: extracellular solute-binding protein family 3; KEGG: rrs:RoseRS_4005 extracellular solute-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.
 
 0.986
Caur_2491
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
    
 0.905
Caur_3172
PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: rca:Rcas_3278 extracellular solute-binding protein family 3.
 
 
 0.905
Caur_1169
PFAM: protein of unknown function DUF214; KEGG: rca:Rcas_1126 protein of unknown function DUF214.
 
 
    0.900
Caur_0996
PFAM: protein of unknown function DUF214; KEGG: rca:Rcas_0266 protein of unknown function DUF214.
 
 
    0.899
Caur_1083
PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_0625 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.876
Caur_2782
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gur:Gura_2052 binding-protein-dependent transport systems inner membrane component.
    
 0.860
Caur_0932
PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_2977 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.839
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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