STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_3301PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1063 major facilitator superfamily MFS_1. (400 aa)    
Predicted Functional Partners:
Caur_3302
PFAM: luciferase family protein; KEGG: rxy:Rxyl_0282 luciferase-like protein.
       0.618
Caur_3304
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rrs:RoseRS_2741 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
  
    0.456
Caur_3303
PFAM: AIG2 family protein; KEGG: sma:SAV5670 hypothetical protein.
       0.448
Caur_3305
Agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: rrs:RoseRS_2742 agmatine deiminase; Belongs to the agmatine deiminase family.
       0.448
Caur_3901
PFAM: major facilitator superfamily MFS_1; KEGG: rca:Rcas_2611 major facilitator superfamily MFS_1.
  
     0.445
Caur_3136
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2504 drug resistance transporter, EmrB/QacA subfamily.
  
   
 0.426
Caur_0104
PFAM: major facilitator superfamily MFS_1; KEGG: rca:Rcas_2058 major facilitator superfamily MFS_1.
  
     0.414
Caur_1436
PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_4401 major facilitator superfamily MFS_1.
  
     0.412
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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