Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_3335PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rca:Rcas_3579 radical SAM domain protein. (392 aa)    
Predicted Functional Partners:
Caur_0397
KEGG: rca:Rcas_0802 4-vinyl reductase 4VR.
  
  
 0.633
Caur_3677
TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase 4VR; KEGG: rca:Rcas_1582 bacteriochlorophyll 4-vinyl reductase.
  
  
 0.633
Caur_3919
KEGG: rru:Rru_A0614 hypothetical protein.
  
  
 0.633
Caur_3336
PFAM: Aldehyde Dehydrogenase_; KEGG: rrs:RoseRS_0265 aldehyde dehydrogenase (NAD(+)); Belongs to the aldehyde dehydrogenase family.
       0.558
Caur_1685
KEGG: rca:Rcas_0802 4-vinyl reductase 4VR.
  
  
 0.532
Caur_2547
PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3888 major facilitator superfamily MFS_1.
  
     0.433
Caur_2440
KEGG: rca:Rcas_3552 hypothetical protein.
  
    0.407
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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