STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_3358PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: rca:Rcas_2276 FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (455 aa)    
Predicted Functional Partners:
Caur_0141
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bcy:Bcer98_3646 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
  
 
0.923
Caur_3359
KEGG: rca:Rcas_3204 hypothetical protein.
       0.594
Caur_3291
TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit; PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rca:Rcas_4111 FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 
 0.573
udk
TIGRFAM: uridine kinase; PFAM: phosphoribulokinase/uridine kinase; KEGG: sru:SRU_0527 uridine kinase.
      0.511
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
   0.437
Caur_3356
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
       0.429
Caur_3357
PFAM: Forkhead-associated protein; KEGG: rca:Rcas_3047 FHA domain containing protein.
       0.429
Caur_1189
TIGRFAM: hydrogenase maturation protease; KEGG: rrs:RoseRS_3538 hypothetical protein.
    
   0.416
Caur_2768
KEGG: rca:Rcas_3803 hydrogenase maturation protease.
    
   0.416
Caur_2769
TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: rca:Rcas_3804 hydrogenase maturation protease.
    
   0.416
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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