STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_3546PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: rrs:RoseRS_2299 electron transfer flavoprotein beta-subunit. (259 aa)    
Predicted Functional Partners:
Caur_3547
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: rrs:RoseRS_2298 electron transfer flavoprotein, alpha subunit.
 0.999
Caur_3582
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rca:Rcas_0249 acyl-CoA dehydrogenase domain protein.
 
 0.979
Caur_1030
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_3775 acyl-CoA dehydrogenase domain protein.
 
 0.977
Caur_2663
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rca:Rcas_3165 acyl-CoA dehydrogenase domain protein.
 
 0.977
Caur_3163
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_4146 acyl-CoA dehydrogenase domain protein.
 
 0.977
Caur_0800
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ape:APE_0385.1 acyl-CoA dehydrogenase, short-chain specific.
 
 0.972
Caur_3557
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rxy:Rxyl_0375 acyl-CoA dehydrogenase-like protein.
 
 0.938
Caur_2087
TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; KEGG: rca:Rcas_3751 geranylgeranyl reductase.
  
 
 0.937
Caur_3845
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: gfo:GFO_0313 acyl-CoA dehydrogenase.
 
 0.931
Caur_1538
KEGG: rca:Rcas_4255 ferredoxin--NADP(+) reductase.
  
 
 0.914
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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