STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Caur_3573KEGG: rca:Rcas_3314 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (490 aa)    
Predicted Functional Partners:
Caur_1680
KEGG: rrs:RoseRS_4040 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.777
Caur_1679
KEGG: rrs:RoseRS_3713 hypothetical protein.
 
   
 0.769
Caur_2461
PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_2654 hypothetical protein.
 
     0.752
Caur_3572
PFAM: alpha-L-rhamnosidase; KEGG: art:Arth_1969 alpha-L-rhamnosidase.
     
 0.711
Caur_3571
KEGG: stp:Strop_3558 hypothetical protein.
       0.689
Caur_3318
PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_4391 O-antigen polymerase.
 
     0.674
Caur_3570
PFAM: phosphatidate cytidylyltransferase; KEGG: rrs:RoseRS_2014 phosphatidate cytidylyltransferase; Belongs to the CDS family.
       0.641
Caur_1200
KEGG: stp:Strop_4398 hypothetical protein.
  
     0.622
Caur_3569
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
       0.605
Caur_2549
KEGG: rrs:RoseRS_0243 glycosyl transferase, family 39.
  
     0.578
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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