Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Caur_3607PFAM: histidine triad (HIT) protein; KEGG: rca:Rcas_0006 histidine triad (HIT) protein. (135 aa)    
Predicted Functional Partners:
Caur_3608
PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_0481 conserved hypothetical protein 374.
       0.818
Caur_3606
Hypothetical protein; KEGG: rrs:RoseRS_4121 ErfK/YbiS/YcfS/YnhG family protein.
  
    0.789
Caur_3605
KEGG: rrs:RoseRS_0070 hypothetical protein.
       0.693
Caur_3604
KEGG: rrs:RoseRS_4537 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase.
  
   0.656
lysS
TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: rca:Rcas_0009 lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
 
 0.580
Caur_3609
PFAM: FAD dependent oxidoreductase; KEGG: rha:RHA1_ro03303 probable oxidoreductase.
     
 0.549
Caur_0844
PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: rrs:RoseRS_2715 glutamine synthetase, catalytic region.
   
   0.544
Caur_1448
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: rrs:RoseRS_2983 glutamine synthetase, type I.
   
   0.544
Caur_3395
KEGG: rrs:RoseRS_1047 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp.
   
   0.544
cobB
PFAM: Silent information regulator protein Sir2; KEGG: rxy:Rxyl_1341 silent information regulator protein Sir2; Belongs to the sirtuin family. Class III subfamily.
    
  0.503
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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