Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Caur_3608PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_0481 conserved hypothetical protein 374. (343 aa)    
Predicted Functional Partners:
Caur_3607
PFAM: histidine triad (HIT) protein; KEGG: rca:Rcas_0006 histidine triad (HIT) protein.
       0.818
Caur_3606
Hypothetical protein; KEGG: rrs:RoseRS_4121 ErfK/YbiS/YcfS/YnhG family protein.
       0.786
Caur_3254
PFAM: conserved hypothetical protein; KEGG: rca:Rcas_4270 hypothetical protein.
  
     0.759
Caur_0505
PFAM: UbiA prenyltransferase; KEGG: rrs:RoseRS_2248 UbiA prenyltransferase; Belongs to the UbiA prenyltransferase family.
     0.703
Caur_3605
KEGG: rrs:RoseRS_0070 hypothetical protein.
       0.700
Caur_3604
KEGG: rrs:RoseRS_4537 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase.
  
  
 0.657
Caur_1112
PFAM: LmbE family protein; KEGG: rca:Rcas_1416 LmbE family protein.
 
     0.620
Caur_2341
PFAM: LmbE family protein; KEGG: rrs:RoseRS_3974 LmbE family protein.
 
     0.594
Caur_1607
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_0130 NAD-dependent epimerase/dehydratase.
 
     0.557
Caur_3609
PFAM: FAD dependent oxidoreductase; KEGG: rha:RHA1_ro03303 probable oxidoreductase.
       0.541
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.