STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_3709KEGG: rca:Rcas_2869 hypothetical protein. (89 aa)    
Predicted Functional Partners:
Caur_3708
KEGG: spe:Spro_4104 hypothetical protein.
 
    0.953
Caur_2253
PFAM: PilT protein domain protein; KEGG: ana:all0753 hypothetical protein.
  
     0.556
Caur_3710
KEGG: mac:MA2043 hypothetical protein.
       0.513
Caur_3711
Hypothetical protein.
       0.513
Caur_2465
KEGG: rrs:RoseRS_1995 PilT protein domain protein.
  
     0.507
Caur_1224
TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: rrs:RoseRS_0080 death-on-curing family protein.
 
    0.436
Caur_3707
Hypothetical protein.
       0.427
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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