STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_3721PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_0164 ABC transporter related. (438 aa)    
Predicted Functional Partners:
Caur_3722
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_0165 binding-protein-dependent transport systems inner membrane component.
 
   
 0.947
Caur_2491
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
    
 0.849
ribX
Binding-protein-dependent transport systems inner membrane component; Part of an ABC transporter complex that transports riboflavin into the cell; Belongs to the binding-protein-dependent transport system permease family.
  
 0.837
Caur_0426
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_0669 binding-protein-dependent transport systems inner membrane component.
  
 0.811
Caur_1169
PFAM: protein of unknown function DUF214; KEGG: rca:Rcas_1126 protein of unknown function DUF214.
 
      0.809
Caur_2538
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppr:PBPRB0686 putative ABC transporter permease protein.
  
 0.799
Caur_1152
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tpt:Tpet_0896 ABC transporter related; Belongs to the ABC transporter superfamily.
 
    
0.778
Caur_0425
PFAM: NMT1/THI5 like domain protein; KEGG: rca:Rcas_0667 NMT1/THI5 like domain protein.
 
  
 0.700
ribY
NMT1/THI5 like domain protein; Part of an ABC transporter complex that transports riboflavin into the cell. Binds riboflavin. Belongs to the NMT1 family.
  
  
 0.700
Caur_2537
PFAM: NMT1/THI5 like domain protein; KEGG: bja:bll3316 ABC transporter substrate-binding protein.
  
  
 0.674
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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