Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_3733PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: rca:Rcas_1828 polysaccharide biosynthesis protein. (543 aa)    
Predicted Functional Partners:
Caur_3734
KEGG: rca:Rcas_0895 hypothetical protein.
 
     0.919
Caur_3318
PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_4391 O-antigen polymerase.
 
  
 0.838
Caur_2461
PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_2654 hypothetical protein.
 
  
 0.834
Caur_3256
PFAM: O-antigen polymerase; KEGG: rca:Rcas_4268 O-antigen polymerase.
 
  
 0.813
Caur_1054
KEGG: rca:Rcas_1950 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.797
Caur_2850
Nucleotide sugar dehydrogenase; KEGG: ade:Adeh_4305 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase.
  
  
 0.795
Caur_1214
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.794
Caur_3257
KEGG: rrs:RoseRS_3578 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.784
Caur_1679
KEGG: rrs:RoseRS_3713 hypothetical protein.
 
     0.758
Caur_1680
KEGG: rrs:RoseRS_4040 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
     0.757
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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