Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_3754KEGG: rca:Rcas_0452 hypothetical protein. (649 aa)    
Predicted Functional Partners:
Caur_3753
PFAM: lipopolysaccharide biosynthesis protein; KEGG: rrs:RoseRS_4219 lipopolysaccharide biosynthesis protein.
       0.802
Caur_3752
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rca:Rcas_0460 hypothetical protein.
       0.764
Caur_3751
TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: rrs:RoseRS_4218 histidinol-phosphate phosphatase family protein.
       0.745
Caur_3755
KEGG: rca:Rcas_0453 hypothetical protein.
  
    0.729
Caur_3756
KEGG: rrs:RoseRS_4226 membrane protein-like protein.
       0.582
Caur_2503
PFAM: WD-40 repeat protein; SMP-30/Gluconolaconase/LRE domain protein; KEGG: rrs:RoseRS_0892 WD-40 repeat protein.
 
      0.535
Caur_2174
KEGG: bra:BRADO4374 hypothetical protein.
  
    0.500
Caur_2757
Hypothetical protein; KEGG: cme:CMH001C similar to hedgehog protein Pfam: Kelch_2 Kelch_1 Hint PROSITE: INTEIN_N_TER PRO_RICH THR_RICH.
  
    0.500
Caur_3115
KEGG: dre:100006915 hypothetical protein LOC100006915.
  
    0.500
Caur_3750
PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: det:DET0206 D-glycero-D-manno-heptose 7-phosphate kinase, putative.
       0.446
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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