STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_3759PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_0458 glycosyl transferase group 1. (436 aa)    
Predicted Functional Partners:
Caur_3757
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_0456 glycosyl transferase group 1.
 
     0.925
Caur_3758
PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: rrs:RoseRS_4228 polysaccharide biosynthesis protein.
 
    0.907
Caur_3760
PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_0459 glycosyl transferase family 2.
    0.850
Caur_3761
PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4232 glycosyl transferase, group 1.
 
     0.849
Caur_3763
PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_0463 glycosyl transferase family 2.
    0.776
Caur_3762
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_0462 glycosyl transferase group 1.
 
     0.748
Caur_0642
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_2472 glycosyl transferase group 1.
  
     0.707
Caur_1509
PFAM: glycosyl transferase group 1; KEGG: dge:Dgeo_2655 glycosyl transferase, group 1.
  
     0.692
Caur_1918
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_3940 glycosyl transferase group 1.
  
     0.651
Caur_0866
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_1839 glycosyl transferase group 1.
  
     0.648
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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