Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_3783KEGG: rca:Rcas_0468 hypothetical protein. (498 aa)    
Predicted Functional Partners:
Caur_3785
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_1626 glycosyl transferase group 1.
 
     0.846
Caur_3775
KEGG: rca:Rcas_3968 hypothetical protein.
 
     0.819
Caur_3784
PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1340 glycosyl transferase, group 1.
       0.818
Caur_3771
SMART: Laminin G; KEGG: rrs:RoseRS_3871 laminin G, sub domain 2.
 
     0.775
Caur_2916
SMART: Pyrrolo-quinoline quinone; KEGG: rca:Rcas_0596 pyrrolo-quinoline quinone.
  
     0.771
Caur_3781
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rrs:RoseRS_4225 radical SAM domain protein.
 
     0.759
Caur_0894
ATP-binding region ATPase domain protein; PFAM: helix-turn-helix- domain containing protein AraC type; periplasmic binding protein/LacI transcriptional regulator; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0204 integral membrane sensor hybrid histidine kinase.
  
     0.749
Caur_3770
PFAM: Laminin G sub domain 2; SMART: Laminin G; LamG domain protein jellyroll fold domain protein; KEGG: rca:Rcas_0555 laminin G sub domain 2.
 
     0.738
Caur_3779
PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4222 glycosyl transferase, family 2.
 
     0.736
Caur_3768
KEGG: rrs:RoseRS_4242 hypothetical protein.
  
     0.728
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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