STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_3867KEGG: fno:Fnod_0251 hypothetical protein. (412 aa)    
Predicted Functional Partners:
Caur_3866
Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: efa:EF1240 sugar-binding transcriptional regulator, LacI family.
 
    0.848
Caur_3864
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fno:Fnod_0288 binding-protein-dependent transport systems inner membrane component.
 
     0.832
Caur_3863
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fno:Fnod_1597 binding-protein-dependent transport systems inner membrane component.
 
     0.825
Caur_3865
KEGG: fno:Fnod_0251 hypothetical protein.
 
    
0.813
Caur_3862
KEGG: fno:Fnod_1596 hypothetical protein.
 
     0.810
Caur_3861
PFAM: NHL repeat containing protein; KEGG: fno:Fnod_0291 NHL repeat containing protein.
 
     0.795
Caur_3868
PFAM: glycoside hydrolase family 35; Glycoside hydrolase family 42 domain protein; KEGG: mca:MCA0941 glycosyl hydrolase, putative; Belongs to the glycosyl hydrolase 35 family.
 
     0.793
Caur_3858
PFAM: extracellular solute-binding protein family 1; KEGG: fno:Fnod_0294 extracellular solute-binding protein family 1.
 
     0.788
Caur_3869
PFAM: glycoside hydrolase family 3 domain protein; KEGG: sus:Acid_6936 glycoside hydrolase, family 3 domain protein; Belongs to the glycosyl hydrolase 3 family.
    0.775
Caur_3859
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fno:Fnod_0293 binding-protein-dependent transport systems inner membrane component.
 
     0.730
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.