STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000001319Zgc:86598; Belongs to the protein kinase superfamily. (336 aa)    
Predicted Functional Partners:
LOC114142078
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
   
 0.987
FUNDC1
FUN14 domain containing 1.
   
 
 0.946
Fundc1
Uncharacterized protein.
   
 
 0.946
ENSXCOP00000016824
Uncharacterized protein.
    
 0.943
Dvl1
DIX domain-containing protein.
    
 0.943
ctnnb1
Catenin (cadherin-associated protein), beta 1.
     
 0.911
ENSXCOP00000027005
Uncharacterized protein.
     
 0.906
ENSXCOP00000003227
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
  
 
0.900
ENSXCOP00000026157
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
   
 0.884
ENSXCOP00000008869
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 0.882
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.