STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000001332Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1990 aa)    
Predicted Functional Partners:
ENSXCOP00000007035
Whirlin a.
    
 0.614
Ush1c
Usher syndrome 1C.
   
 0.592
LOC114152256
Usher syndrome 1Gb (autosomal recessive).
   
 0.526
anks4b
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.526
LOC114159443
Usher syndrome 1Ga (autosomal recessive).
   
 0.526
ENSXCOP00000008554
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.401
ENSXCOP00000011147
Calmodulin 3a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.401
ENSXCOP00000016784
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.401
LOC114149962
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
 0.400
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.