Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Aasdh | ENSXCOP00000000341 | ENSXCOP00000011500 | ENSXCOP00000000341 | AMP-binding domain-containing protein. | Hydroxysteroid dehydrogenase like 2. | 0.566 |
Aasdh | ENSXCOP00000002073 | ENSXCOP00000011500 | ENSXCOP00000002073 | AMP-binding domain-containing protein. | Si:dkey-178e17.3. | 0.686 |
Aasdh | ENSXCOP00000011495 | ENSXCOP00000011500 | ENSXCOP00000011495 | AMP-binding domain-containing protein. | Uncharacterized protein. | 0.920 |
Aasdh | ndufab1 | ENSXCOP00000011500 | ENSXCOP00000024033 | AMP-binding domain-containing protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.995 |
ENSXCOP00000000341 | Aasdh | ENSXCOP00000000341 | ENSXCOP00000011500 | Hydroxysteroid dehydrogenase like 2. | AMP-binding domain-containing protein. | 0.566 |
ENSXCOP00000000341 | ENSXCOP00000002073 | ENSXCOP00000000341 | ENSXCOP00000002073 | Hydroxysteroid dehydrogenase like 2. | Si:dkey-178e17.3. | 0.634 |
ENSXCOP00000000341 | ENSXCOP00000011495 | ENSXCOP00000000341 | ENSXCOP00000011495 | Hydroxysteroid dehydrogenase like 2. | Uncharacterized protein. | 0.566 |
ENSXCOP00000000341 | Med14 | ENSXCOP00000000341 | ENSXCOP00000024878 | Hydroxysteroid dehydrogenase like 2. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.468 |
ENSXCOP00000000341 | ndufab1 | ENSXCOP00000000341 | ENSXCOP00000024033 | Hydroxysteroid dehydrogenase like 2. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.747 |
ENSXCOP00000002073 | Aasdh | ENSXCOP00000002073 | ENSXCOP00000011500 | Si:dkey-178e17.3. | AMP-binding domain-containing protein. | 0.686 |
ENSXCOP00000002073 | ENSXCOP00000000341 | ENSXCOP00000002073 | ENSXCOP00000000341 | Si:dkey-178e17.3. | Hydroxysteroid dehydrogenase like 2. | 0.634 |
ENSXCOP00000002073 | ENSXCOP00000010051 | ENSXCOP00000002073 | ENSXCOP00000010051 | Si:dkey-178e17.3. | Mediator complex subunit 23. | 0.613 |
ENSXCOP00000002073 | ENSXCOP00000011495 | ENSXCOP00000002073 | ENSXCOP00000011495 | Si:dkey-178e17.3. | Uncharacterized protein. | 0.686 |
ENSXCOP00000002073 | MED10 | ENSXCOP00000002073 | ENSXCOP00000003292 | Si:dkey-178e17.3. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.585 |
ENSXCOP00000002073 | Med14 | ENSXCOP00000002073 | ENSXCOP00000024878 | Si:dkey-178e17.3. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.608 |
ENSXCOP00000002073 | Nup155 | ENSXCOP00000002073 | ENSXCOP00000003873 | Si:dkey-178e17.3. | Nucleoporin 155. | 0.602 |
ENSXCOP00000002073 | Nup93 | ENSXCOP00000002073 | ENSXCOP00000007468 | Si:dkey-178e17.3. | Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. | 0.640 |
ENSXCOP00000002073 | RANBP2 | ENSXCOP00000002073 | ENSXCOP00000001139 | Si:dkey-178e17.3. | RAN binding protein 2. | 0.591 |
ENSXCOP00000002073 | ndufab1 | ENSXCOP00000002073 | ENSXCOP00000024033 | Si:dkey-178e17.3. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.740 |
ENSXCOP00000010051 | ENSXCOP00000002073 | ENSXCOP00000010051 | ENSXCOP00000002073 | Mediator complex subunit 23. | Si:dkey-178e17.3. | 0.613 |
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