STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000005646Uncharacterized protein. (736 aa)    
Predicted Functional Partners:
ENSXCOP00000005659
KASH domain-containing protein.
 
     0.923
ENSXCOP00000004196
Uncharacterized protein.
 
     0.890
ENSXCOP00000004210
KASH domain-containing protein.
 
     0.797
ENSXCOP00000005652
Uncharacterized protein.
 
     0.773
ENSXCOP00000005781
KASH domain-containing protein.
 
      0.686
ENSXCOP00000005656
Uncharacterized protein.
 
     0.645
ENSXCOP00000001006
Uncharacterized protein; Belongs to the intermediate filament family.
    
 0.608
ENSXCOP00000013740
Sad1 and UNC84 domain containing 1.
    
 0.589
ENSXCOP00000005333
Lamin A; Belongs to the intermediate filament family.
    
 0.562
ENSXCOP00000004217
SUN domain-containing protein.
    
 0.497
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.