STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000008138MFS domain-containing protein. (494 aa)    
Predicted Functional Partners:
ENSXCOP00000011200
Integrator complex subunit 9.
    
 0.510
Ints1
Integrator complex subunit 1.
    
 0.500
ENSXCOP00000020528
Integrator complex subunit 11.
    
 0.493
Ints4
Integrator complex subunit 4.
    
 0.477
Ints3
Integrator complex subunit 3.
    
 0.472
ints7
Integrator complex subunit 7.
    
 0.471
ints13
Integrator complex subunit 13.
    
 0.470
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.