STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000008169Crystallin, gamma MX; Belongs to the beta/gamma-crystallin family. (178 aa)    
Predicted Functional Partners:
cryaa
Crystallin, alpha A; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.715
ENSXCOP00000016316
Usher syndrome 2A (autosomal recessive, mild).
      
 0.584
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
      
 0.536
LOC114151321
Lens intrinsic membrane protein 2.2.
   
  
 0.525
Tas1r2
Taste receptor, type 1, member 1.
      
 0.519
Edar
Ectodysplasin A receptor.
      
 0.433
LOC114161391
Somatolactin alpha.
   
    0.428
ENSXCOP00000024373
Uncharacterized protein.
   
    0.428
ENSXCOP00000024429
Uncharacterized protein.
   
    0.428
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.