STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000008468Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (188 aa)    
Predicted Functional Partners:
ENSXCOP00000009329
Intersectin 2a.
    
 0.816
ENSXCOP00000016163
Uncharacterized protein.
    
 0.816
ENSXCOP00000017978
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.748
ENSXCOP00000018733
Uncharacterized protein.
    
 0.727
ENSXCOP00000018734
Intersectin 1 (SH3 domain protein).
    
 0.727
ENSXCOP00000014943
AP-1 complex subunit gamma.
    
 0.722
ENSXCOP00000018396
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.712
Gak
Uncharacterized protein.
    
 0.705
ENSXCOP00000024724
ADP-ribosylation factor GTPase activating protein 1.
   
 0.677
Mrpl45
Mitochondrial ribosomal protein L45.
   
  
 0.639
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.