STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tkfcTriokinase/FMN cyclase. (578 aa)    
Predicted Functional Partners:
gpd2
Glycerol-3-phosphate dehydrogenase 2 (mitochondrial).
    
 0.990
Ifih1
Interferon induced with helicase C domain 1.
    
 0.966
ENSXCOP00000025648
Triosephosphate isomerase.
  
 
 0.955
Sord
Sorbitol dehydrogenase.
  
 0.916
LOC114161974
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
   
 
 0.915
aldoc
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
   
 
 0.915
LOC114144240
Glycerol-3-phosphate dehydrogenase [NAD(+)].
   
 
 0.853
gpd1
Glycerol-3-phosphate dehydrogenase [NAD(+)].
   
 
 0.853
LOC114140502
Glycerol-3-phosphate dehydrogenase [NAD(+)].
   
 
 0.853
ENSXCOP00000009360
Si:ch73-21k16.5; Belongs to the GPAT/DAPAT family.
     
 0.809
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.