STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A3Solute carrier family 39 member 3. (247 aa)    
Predicted Functional Partners:
Mtx3
Metaxin.
    
 
 0.695
LOC114158614
SAMM50 sorting and assembly machinery component.
    
 
 0.633
LOC114160829
Sorting and assembly machinery component 50 homolog, like.
    
 
 0.633
SLC39A11
Solute carrier family 39 member 11.
   
 0.509
Slc30a1
Uncharacterized protein.
   
 
 0.445
ENSXCOP00000000420
Solute carrier family 39 member 13.
   
 0.440
timm13
Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family.
   
 
 0.436
Tomm22
Translocase of outer mitochondrial membrane 22 homolog (yeast).
    
 
 0.436
ENSXCOP00000024591
Solute carrier family 30 member 4.
   
 
 0.424
SLC11A2
Solute carrier family 11 member 2.
      
 0.406
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.