STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Akap7A kinase (PRKA) anchor protein 7. (89 aa)    
Predicted Functional Partners:
Sod2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
   0.787
ybey
YbeY metalloendoribonuclease.
    
   0.787
ENSXCOP00000026143
Death associated protein 3.
    
   0.787
rps11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
    
   0.750
ENSXCOP00000014542
Uncharacterized protein.
    
 0.733
mrpl13
Mitochondrial ribosomal protein L13.
   
   0.729
mrpl47
Mitochondrial ribosomal protein L47.
    
   0.722
ENSXCOP00000004497
Acyl-CoA synthetase family member 2.
    
   0.722
Mrpl15
Mitochondrial ribosomal protein L15.
    
   0.722
Mrpl21
Mitochondrial ribosomal protein L21.
    
   0.722
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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