STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000013626Chromo domain-containing protein. (60 aa)    
Predicted Functional Partners:
ENSXCOP00000013625
Chromo domain-containing protein.
  
 
0.862
rnf2
Ring finger protein 2.
    
 0.805
RING1
Ring finger protein 1.
    
 0.805
ENSXCOP00000021134
Chromobox homolog 6a.
    
 0.767
ENSXCOP00000009106
Chromo domain-containing protein.
    
0.732
ENSXCOP00000024418
Chromobox homolog 2 (Drosophila Pc class).
    
0.732
Eed
Embryonic ectoderm development.
    
 0.633
ENSXCOP00000006636
Uncharacterized protein.
    
 0.623
ENSXCOP00000007630
Uncharacterized protein.
    
 0.623
ENSXCOP00000007907
Uncharacterized protein.
    
 0.623
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.