STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asb12Ankyrin repeat and SOCS box-containing 12b. (317 aa)    
Predicted Functional Partners:
ENSXCOP00000012506
COMM domain containing 8.
   
  0.641
Commd1
Copper metabolism (Murr1) domain containing 1.
    
  0.631
ENSXCOP00000022714
COMM domain containing 4.
    
 0.624
Cul5
Cullin 5a; Belongs to the cullin family.
    
 0.620
commd2
COMM domain containing 2.
    
  0.616
Commd9
COMM domain containing 9.
    
  0.616
ENSXCOP00000020595
Ankyrin repeat and SOCS box containing 6.
  
  
 0.604
rnf7
Ring finger protein 7.
    
 0.600
Commd6
COMM domain containing 6.
    
  0.583
ENSXCOP00000013634
WD repeat and SOCS box containing 2.
    
 0.574
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.