STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000015253Kinesin family member 7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1286 aa)    
Predicted Functional Partners:
ENSXCOP00000009050
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.819
smo
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
   
 0.801
Sufu
Suppressor of fused homolog (Drosophila).
    
 0.777
ENSXCOP00000019667
GLI family zinc finger 3.
    
 0.731
ENSXCOP00000000652
Uncharacterized protein.
 
 
 0.693
ENSXCOP00000022445
POC5 centriolar protein homolog (Chlamydomonas).
   
  
 0.649
Ttll11
Tubulin tyrosine ligase-like family, member 11.
   
  
 0.643
Ttl
Tubulin tyrosine ligase.
      
 0.639
Gli2
GLI family zinc finger 2a.
    
 0.613
ENSXCOP00000014158
GLI family zinc finger 2b.
    
 0.613
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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