STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000015725Uncharacterized protein. (238 aa)    
Predicted Functional Partners:
Cmtr2
Cap methyltransferase 2.
      
 0.530
ENSXCOP00000017744
Cilia and flagella associated protein 36.
      
 0.528
ENSXCOP00000009435
CDP-L-ribitol pyrophosphorylase A.
   
    0.489
ENSXCOP00000011933
Centrin, EF-hand protein, 2.
   
    0.489
ENSXCOP00000020638
Uncharacterized protein.
   
    0.489
Lin52
Lin-52 DREAM MuvB core complex component.
      
 0.461
ENSXCOP00000003281
WD repeat domain 90.
   
  
 0.424
AREL1
Apoptosis resistant E3 ubiquitin protein ligase 1.
      
 0.406
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
   
  
 0.403
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.