STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000017630NRDE-2, necessary for RNA interference, domain containing. (1032 aa)    
Predicted Functional Partners:
ENSXCOP00000006969
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.829
ENSXCOP00000013704
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.829
ENSXCOP00000021077
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.829
Ccdc174
Coiled-coil domain containing 174.
    
 
 0.710
ENSXCOP00000002722
Serine/threonine-protein kinase PLK.
    
 
 0.696
Plk2
Serine/threonine-protein kinase PLK.
    
 
 0.696
PLK1
Serine/threonine-protein kinase PLK.
    
 
 0.696
Plk4
Polo-like kinase 4 (Drosophila).
    
 
 0.673
ENSXCOP00000000870
Importin N-terminal domain-containing protein.
    
 
 0.643
Ipo8
Importin 8.
    
 
 0.643
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.