STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000018208Protein tyrosine phosphatase non-receptor type 9b. (746 aa)    
Predicted Functional Partners:
Ptpn23
Protein tyrosine phosphatase, non-receptor type 23, a.
    
0.473
Znf414
C2H2-type domain-containing protein.
     
 0.467
Ptn
Pleiotrophin.
    
 0.445
ENSXCOP00000002388
Insulin receptor b.
   
 0.406
Pts
6-pyruvoyltetrahydropterin synthase.
    
 
 0.406
ENSXCOP00000006293
Sema domain-containing protein.
    
 0.406
Met
Protein kinase domain-containing protein.
    
 0.406
ENSXCOP00000013278
Sema domain-containing protein.
    
 0.406
ENSXCOP00000013415
Protein kinase domain-containing protein.
    
 0.406
Mst1r
Sema domain-containing protein.
    
 0.406
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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