STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000019255PDZ domain-containing protein. (161 aa)    
Predicted Functional Partners:
ENSXCOP00000002786
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.809
ENSXCOP00000025077
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.809
PARD6B
Par-6 family cell polarity regulator beta.
    
 0.783
ENSXCOP00000007169
Par-6 family cell polarity regulator alpha.
    
 0.783
Pard6g
Par-6 family cell polarity regulator gamma b.
    
 0.783
ENSXCOP00000018399
CA domain-containing protein; Cadherins are calcium-dependent cell adhesion proteins.
    
 
 0.556
Ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.553
Gpsm2
Uncharacterized protein.
    
 
 0.550
ENSXCOP00000016515
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.541
LOC114138068
Ribosomal protein S27a.
   
  0.540
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.