Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSXCOP00000001970 | ENSXCOP00000021343 | ENSXCOP00000001970 | ENSXCOP00000021343 | Importin N-terminal domain-containing protein. | BHLH domain-containing protein. | 0.687 |
ENSXCOP00000001970 | Kpnb1 | ENSXCOP00000001970 | ENSXCOP00000001957 | Importin N-terminal domain-containing protein. | Karyopherin (importin) beta 1. | 0.938 |
ENSXCOP00000001970 | Srebf2 | ENSXCOP00000001970 | ENSXCOP00000021290 | Importin N-terminal domain-containing protein. | Uncharacterized protein. | 0.687 |
ENSXCOP00000018903 | ENSXCOP00000021343 | ENSXCOP00000018903 | ENSXCOP00000021343 | E1A binding protein p300 b. | BHLH domain-containing protein. | 0.586 |
ENSXCOP00000018903 | Srebf2 | ENSXCOP00000018903 | ENSXCOP00000021290 | E1A binding protein p300 b. | Uncharacterized protein. | 0.586 |
ENSXCOP00000021343 | ENSXCOP00000001970 | ENSXCOP00000021343 | ENSXCOP00000001970 | BHLH domain-containing protein. | Importin N-terminal domain-containing protein. | 0.687 |
ENSXCOP00000021343 | ENSXCOP00000018903 | ENSXCOP00000021343 | ENSXCOP00000018903 | BHLH domain-containing protein. | E1A binding protein p300 b. | 0.586 |
ENSXCOP00000021343 | Kpnb1 | ENSXCOP00000021343 | ENSXCOP00000001957 | BHLH domain-containing protein. | Karyopherin (importin) beta 1. | 0.687 |
ENSXCOP00000021343 | MED15 | ENSXCOP00000021343 | ENSXCOP00000002022 | BHLH domain-containing protein. | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.532 |
ENSXCOP00000021343 | MED15-2 | ENSXCOP00000021343 | ENSXCOP00000002030 | BHLH domain-containing protein. | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.539 |
ENSXCOP00000021343 | Mbtps1 | ENSXCOP00000021343 | ENSXCOP00000013049 | BHLH domain-containing protein. | Membrane-bound transcription factor peptidase, site 1. | 0.647 |
ENSXCOP00000021343 | NPC1L1 | ENSXCOP00000021343 | ENSXCOP00000020790 | BHLH domain-containing protein. | NPC1 like intracellular cholesterol transporter 1. | 0.800 |
ENSXCOP00000021343 | Npc1 | ENSXCOP00000021343 | ENSXCOP00000021508 | BHLH domain-containing protein. | Niemann-Pick disease, type C1. | 0.797 |
ENSXCOP00000021343 | Scap | ENSXCOP00000021343 | ENSXCOP00000007824 | BHLH domain-containing protein. | SREBF chaperone. | 0.927 |
ENSXCOP00000021343 | Srebf2 | ENSXCOP00000021343 | ENSXCOP00000021290 | BHLH domain-containing protein. | Uncharacterized protein. | 0.897 |
Kpnb1 | ENSXCOP00000001970 | ENSXCOP00000001957 | ENSXCOP00000001970 | Karyopherin (importin) beta 1. | Importin N-terminal domain-containing protein. | 0.938 |
Kpnb1 | ENSXCOP00000021343 | ENSXCOP00000001957 | ENSXCOP00000021343 | Karyopherin (importin) beta 1. | BHLH domain-containing protein. | 0.687 |
Kpnb1 | Srebf2 | ENSXCOP00000001957 | ENSXCOP00000021290 | Karyopherin (importin) beta 1. | Uncharacterized protein. | 0.687 |
MED15 | ENSXCOP00000021343 | ENSXCOP00000002022 | ENSXCOP00000021343 | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | BHLH domain-containing protein. | 0.532 |
MED15 | Srebf2 | ENSXCOP00000002022 | ENSXCOP00000021290 | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.532 |
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