STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000023667Secretory carrier-associated membrane protein. (67 aa)    
Predicted Functional Partners:
KCNH7
Potassium voltage-gated channel subfamily H member 7.
      
 0.635
Atg4c
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.
      
 0.598
ENSXCOP00000023936
Nucleolar complex protein 3 homolog.
      
 0.485
SLC11A2
Solute carrier family 11 member 2.
      
 0.485
ENSXCOP00000011235
Integral membrane protein 2Bb.
    
 
 0.453
Synrg
Synergin, gamma.
    
 
 0.430
fign
Fidgetin; Belongs to the AAA ATPase family.
   
  
 0.403
ENSXCOP00000014363
Epsin 3a.
   
  
 0.402
ENSXCOP00000025956
Epsin 1.
   
  
 0.402
ENSXCOP00000025395
ENTH domain-containing protein.
      
 0.400
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.