STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000023783Ankyrin repeat and SOCS box containing 7. (184 aa)    
Predicted Functional Partners:
Cul5
Cullin 5a; Belongs to the cullin family.
    
 0.724
Asb13
Uncharacterized protein.
  
 
0.639
ENSXCOP00000020595
Ankyrin repeat and SOCS box containing 6.
    
 0.592
LOC114160768
Uncharacterized protein.
  
 
0.582
Asb1
Ankyrin repeat and SOCS box containing 1.
  
 
 0.581
ENSXCOP00000003206
Ankyrin repeat and SOCS box-containing 12a.
  
 
 0.574
ENSXCOP00000012506
COMM domain containing 8.
   
  0.570
rnf7
Ring finger protein 7.
    
 0.565
ENSXCOP00000003281
WD repeat domain 90.
    
 0.563
asb12
Ankyrin repeat and SOCS box-containing 12b.
  
 
 0.560
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.