STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000025184Sarcoglycan, delta (dystrophin-associated glycoprotein). (258 aa)    
Predicted Functional Partners:
ENSXCOP00000005166
Sarcoglycan, alpha.
   
 0.690
sspn
Sarcospan (Kras oncogene-associated gene).
   
 0.671
Sgce
Sarcoglycan, epsilon.
   
 0.602
Sgcb
Sarcoglycan, beta (dystrophin-associated glycoprotein).
    
 0.582
ENSXCOP00000017196
Sarcoglycan, gamma.
  
 
0.581
ENSXCOP00000010795
Peptidase S72 domain-containing protein.
    
 0.568
Dag1
Dystroglycan 1.
    
 0.568
ENSXCOP00000009370
Calponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity.
   
  
 0.564
meox2
Mesenchyme homeobox 2a.
   
  
 0.531
Cnn1
Calponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity.
   
  
 0.522
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.